1996 Inaugural Player Draft
- Mark Chung – 1st round (6th overall)
- Peter Isaacs – 2nd round (16th overall)
- Sean Bowers – 3rd round (26th overall)
- Eric Eichmann – 4th round (36th overall)
- Jeff Causey – 5th round (46th overall)
- Tommy Reasoner – 6th round (56th overall)
- Scott Uderitz – 7th round (66th overall)
- Nyanforth Peters – 8th round (76th overall)
- Uche Okafor – 9th round (86th overall)
- Alan Prampin – 10th round (96th overall)
- Phil Wellington – 11th round (106th overall)
- Kevin Koetters – 12th round (116th overall)
- Billy Baumhoff – 13th round (126th overall)
- Terry Woodberry – 14th round (136th overall)
- Samuel Ekeme – 15th round (146th overall)
- Ken Snow – 16th round (156th overall)
1996 MLS College Draft
- Matt McKeon – 1st round (1st overall)
- Chris Snitko – 1st round (5th overall)
- Diego Gutierrez – 2nd round (15th overall)
- Dion Sebwe – 3rd round (25th overall)
1996 MLS Supplemental Draft
- Pat Harrington – 1st round (5th overall)
- David Moxom – 2nd round (15th overall)
- Paul Wright – 3rd round (25th overall)
1997 MLS College Draft
- Brian Johnson – 1st round (7th overall)
- Ike Udeh – 2nd round (17th overall)
- Jake Joy – 3rd round (27th overall)
1997 MLS Supplemental Draft
- Ryan Tinsley – 1st round (7th overall)
- Ricci Greenwood – 2nd round (17th overall)
1998 MLS College Draft
- Chris Klein – 1st round (4th overall)
- Tom Hardy – 2nd round (20th overall)
- Mario Sanchez – 3rd round (32nd overall)
1998 MLS Supplemental Draft
- Goran Hunjak – 1st round (8th overall)
- Rodney Rambo – 2nd round (20th overall)
1999 MLS College Draft
- Chris Brown – 1st round (5th overall)
- John Wilson – 2nd round (14th overall)
- Kevin Kalish – 3rd round (26th overall)
1999 MLS Supplemental Draft
- Brandon Prideaux – 1st round (2nd overall)
- Ryan Turner – 2nd round (12th overall)
2000 MLS SuperDraft
- Nick Garcia – 1st round (2nd overall)
- John Wilson – 1st round (9th overall)
- Peter Byaruhanga – 2nd round (15th overall)
- Kerry Zavagnin – 3rd round (30th overall)
- Tom Zawislan – 5th round (50th overall)
- Casey Sweeney – 6th round (62nd overall)
2001 MLS SuperDraft
- Jose Burciaga Jr. – 1st round (12th overall)
- Andrew Gregor – 2nd round (24th overall)
- Ben Stafford – 3rd round (35th overall)
- Pablo Webster – 4th round (48th overall)
- Narciso Fernandes – 5th round (59th overall)
- Matthew Cross – 6th round (72nd overall)
2002 MLS Dispersal Draft
- Eric Quill – 1st round (4th overall)
- Preki – 2nd round (14th overall)
2002 MLS SuperDraft
- O’Neil Peart – 3rd round (32nd overall)
- Chris Brunt – 3rd round (37th overall)
- Dominic DePra – 4th round (43rd overall)
- Davy Arnaud – 5th round (50th overall)
- Brian Lavin – 5th round (57th overall)
- Dane Erickson – 6th round (64th overall)
- Mark Spears – 6th round (65th overall)
2003 MLS SuperDraft
- Taylor Graham – 4th round (33rd overall)
- Jack Jewsbury – 5th round (43rd overall)
- Kevin Friedland – 6th round (53rd overall)
- Byron Carmichael – 6th round (60th overall)
2004 MLS SuperDraft
- Matt Taylor – 1st round (4th overall)
- William Hesmer – 2nd round (17th overall)
- Jay Albert – 4th round (37th overall)
- Justin Detter – 5th round (47th overall)
- Ryan Barber – 5th round (48th overall)
2005 MLS SuperDraft
- Scott Sealy – 1st round (11th overall)
- Ryan Pore – 2nd round (16th overall)
- Christopher Sawyer – 2nd round (24th overall)
- John Minagawa-Webster – 3rd round (47th overall)
2005 MLS Supplemental Draft
- Edwin Ruiz – 1st round (11th overall)
- Doug Lascody – 3rd round (35th overall)
- Ryan Caugherty – 4th round (47th overall)
2006 MLS SuperDraft
- Yura Movsisyan – 1st round (4th overall)
- Lance Watson – 2nd round (16th overall)
- Tyson Wahl – 2nd round (19th overall)
- Matt Groenwald – 3rd round (28th overall)
- Stephen Shirley – 3rd round (29th overall)
- Eric Kronberg – 4th round (40th overall)
2006 MLS Supplemental Draft
- Anthony Noriega – 1st round (4th overall)
- Ryan McMahen – 2nd round (16th overall)
- Corey Farabi – 3rd round (28th overall)
- Chris Hamberger – 4th round (40th overall)
- Luke Enna – 4th round (45th overall)
2007 MLS SuperDraft
- Michael Harrington – 1st round (3rd overall)
- Edson Elcock – 3rd round (29th overall)
- Kurt Morsink – 4th round (42nd overall)
2007 MLS Supplemental Draft
- Aaron Hohlbein –1st round (3rd overall)
- Michael Todd – 2nd round (16th overall)
- Chris Konopka – 3rd round (29th overall)
- Eric Frimpong – 3rd round (30th overall)
- A.J. Godbolt – 3rd round (32nd overall)
- Michael Kraus – 4th round (48th overall)
- Willy Guadarrama – 4th round (52nd overall)
2008 MLS SuperDraft
- Chance Myers – 1st round (1st overall)
- Roger Espinoza – 1st round (11th overall)
- Yomby William – 2nd round (23rd overall)
- Jonathan Leathers – 2nd round (25th overall)
- Matt Marquess – 3rd round (39th overall)
- Raushawn McKenzie – 4th round (53rd overall)
2008 MLS Supplemental Draft
- Pat Healey – 1st round (11th overall)
- Vincent Arze – 2nd round (25th overall)
- Tom Gray – 3rd round (39th overall)
- Andrew Kartunen – 4th round (53rd overall)
2009 MLS SuperDraft
- Matt Besler – 1st round (8th overall)
- Doug DeMartin – 2nd round (22nd overall)
- Graham Zusi – 2nd round (23rd overall)
- Neal Kitson – 3rd round (42nd overall)
- Akeem Priestley – 4th round (50th overall)
2010 MLS SuperDraft
- Teal Bunbury – 1st round (4th overall)
- Korede Aiyegbusi – 2nd round (20th overall)
- Nick Cardenas – 3rd round (36th overall)
- Mauro Fuzetti – 3rd round (41st overall)
- Ofori Sarkodie – 4th round (52nd overall)
2011 MLS SuperDraft
- C.J. Sapong – 1st round (10th Overall)
- J.T. Murray – 2nd round (32nd Overall)
- Konrad Warzycha – 3rd Round (46th Overall)
2011 MLS Supplemental Draft
- Sam Scales – 1st round (10th overall)
- Mike Jones – 2nd round (28th overall)
- Michal Mravec – 3rd round (46th overall)
2012 MLS SuperDraft
- Dom Dwyer - 1st round (16th overall)
- Cyprian Hedrick - 2nd round (30th overall)
2012 MLS Supplemental Draft
- Shawn Singh - 1st round (16th overall)
- Pablo Punyed - 2nd round (32nd overall)
- Stefan Antonijevic - 3rd round (43rd overall)
- Kyle Miller - 3rd round (48th overall)
2013 MLS SuperDraft
- Mikey Lopez - 1st round (14th overall)
2013 MLS Supplemental Draft
- Christian Duke - 1st round (14th overall)
- Mitchell Cardenas - 2nd round (33rd overall)
- Brian Fekete - 3rd round (52nd overall)
- Mike Reidy - 4th round (71st overall)
2014 MLS SuperDraft
- Adnan Gabeljic - 2nd round (38th overall)
- Peter Schmetz - 3rd round (41st overall)
- Alex Martinez - 3rd round (57th overall)
- Reinaldo Brenes - 4th round (76th overall)
2015 MLS SuperDraft
- Connor Hallisey - 1st round (10th overall)
- Saad Abdul-Salaam - 1st round (12th overall)
- Amadou Dia - 1st round (20th overall)
- James Rogers - 3rd round (53rd overall)
- Tony Rocha - 4th round (73rd overall)
2016 MLS SuperDraft
- Ryan James - 3rd Round (52nd overall)
- Faik Hajderovic - 4th Round (72nd overall)
2017 MLS SuperDraft
- Colton Storm - 1st Round (14th overall)
- David Greczek - 3rd Round (58th overall)
2018 MLS SuperDraft
- Eric Dick - 1st Round (13th overall)
- Graham Smith - 1st Round (18th overall)
- Will Bagrou - 4th Round (75th overall)
- Wilfred Williams - 4th Round (82nd overall)
2019 MLS SuperDraft
- Kamar Marriott - 1st Round (21st overall)
- Camden Riley - 2nd Round (45th overall)
- Franky Martinez - 3rd Round (69th overall)
2020 MLS SuperDraft
- Jaret Townsend - 3rd Round (58th overall)
- James Kasak - 4th Round (84th overall)
2021 MLS SuperDraft
- Matt Constant - 2nd Round (50th overall)
- Jamil Roberts - 3rd Round (77th overall)
2022 MLS SuperDraft
- Esai Easley - 1st Round (22nd overall)
- Brett St. Martin - 2nd Round (50th overall)
2023 MLS SuperDraft
- Stephen Afrifa - 1st Round (8th overall)
- Chris Rindov - 2nd Round (37th overall)